107 dependents
Package Description Downloads/month
Zarr I/O backend for HDMF 98K
DANDI command line client to facilitate common operations 68K
Tool to help inspect NWB files for compliance with NWB Best Practices 60K
Standalone utilities for SLEAP pose tracking data. 23K
NWB extension to store pose estimation data 21K
NWB extension to store event and TTL pulse data 20K
PYthon Neural Analysis Package :pineapple: 18K
NWB extension for working with multi-subjects data 17K
code for reading and processing Allen Institute for Brain Science data 13K
Tools for accessing and packaging data from behavior and epyhys sessions from th... 9K
Python-based module for extracting from, converting between, and handling optica... 9K
Web app for viewing results of ephys spike sorting 6K
This is an NWB extension for storing metadata of devices used in optical experim... 6K
Create NWB files by converting and combining neural data in proprietary formats ... 5K
NWB extension of sounds 5K
Functions to help with postprocessing dynamic foraging data. 4K
Generated from aind-library-template 4K
This is an NWB extension for storing fiber photometry recordings and associated ... 4K
Description of my package 4K
A Python toolbox for analysing animal body movements across space and time 3K
NWB extension to store additional metadata and data types for Loren Frank's Lab 3K
NWB extension for optogenetics metadata 2K
A software for electrophysiology data visualisation and analysis. Multi file for... 2K
Implement proposal for hierarchical metadata strucutre for intracellular electro... 2K
data type for holding power or phase spectra for a signal 2K
Generated from aind-library-template 2K
3D grayscale image. 2K
computes intrinsic cell features from intracellular electrophysiology data 2K
Guided Photometry Analysis in Python, a free and open-source FP analysis tool. 1K
Variational Animal Motion Embedding. 1K
Common NWB use cases and simplified interface for common usage 1K
Interactive Jupyter widgets for playing synchronized videos and visualizing po... 1K
Package to analyze calcium fluorescence events in astrocytes 1K
1K
Fast, volumetric cell detection. In development. 1K
Neuroscience data analysis framework for reproducible research built by Loren Fr... 1K
Analysis pipeline for rodent widefield calcium imaging data. 1K
Calcium Imaging Pipeline Tool 997
Reorganize NWB files into a BIDS directory layout. 974
NWB (Neurodata Without Borders) file reading and writing for ezmsg 875
Alyx Connector, based on the Open Neurophysiology Environment 834
Local database for experimental neuroscience laboratories 780
State control system for automated, high-throughput behavioral training based on... 730
LINC Client to facilitate common operations 669
Computation of local and signal-close-to-noise calcium activity 633
Antelop is a data management and processing tool for systems neuroscientists 583
A package for processing neural datasets 553
Extension for defining neural probes in the probeinterface format 538
Mouse wiskers body kinematics and behavior 488
NWB extension for VAME. 473