24 dependents
| Package | Description | Downloads/month |
|---|---|---|
| A multivariate RNA Velocity model to estimate future cell states with uncertaint... | 2K | |
| Single cell analysis of B cells | 541 | |
| A single-cell analysis package to elucidate environmental factors controlling ce... | 537 | |
| single cell velocity analysis | 514 | |
| Multivariate stochastic modeling for transcriptional dynamics with cell-specific... | 489 | |
| Estimation of RNA velocity with variational inference. | 378 | |
| Graph Variational Autoencoder for scRNA-seq velocity | 358 | |
| Multi-omic extension of single-cell RNA velocity | 317 | |
| CellMap - RNA landscape inference method | 286 | |
| 278 | ||
| Deep Velocity | 262 | |
| 231 | ||
| Bayesian Inference of RNA Velocity | 173 | |
| A package for single cell pseudotime | 164 | |
| Estimation of RNA velocity with variational inference. | 143 | |
| Cafe(CelluAr Fate Explorer): An integrated platform for exploring cell fate | 137 | |
| A Deep Learning framework for Cell-Cell Communication Velocity | 129 | |
| Analyze cell state dynamics dependent on extrinsic factors | 110 | |
| Velocity inference from multi-lineage, multi-omic, and multi-sample single-cell ... | 86 | |
| A single-cell analysis package to elucidate environmental factors controlling ce... | 72 | |
| TopicVelo: Dissection and Integration of Bursty Transcriptional Dynamics for Com... | 71 | |
| RS for Proteomics | 69 | |
| A hypothesis test for velocity embeddings. | 65 | |
| Interpretable learning of cellular dynamics and gene interactions network | 50 |
