15 dependents
Package Description Downloads/month
Developer tools for M3 (MedicalMultitaskModeling) 25K
Python library for converting WSI files to DICOM 7K
A plugin for batch processing of confocal and whole-slide microscopy images of b... 1K
This repository contains code to extract features from 11 different foundation m... 784
Run patch-based classification on pathology whole slide images. 582
The Vizgen Post-processing Tool (VPT) enables users to reprocess and refine the ... 370
A histopathology toolkit for working with whole slide images and their annotatio... 346
Project to support machine learning on whole slide images. Currently a placehold... 333
TissueLab SDK 312
Xarray extension that uses xarray to lazy read 2D Tiff files. 281
Toolbox for histopathology image analysis 275
Lab for quantitative bioimage analysis experiments in Python 175
CLI tool to run specimen-level inference on whole slide images 102
Memory-efficient On-the-fly Tiling of Histological images 68
Run specimen-level inference on whole slide images. 63