665 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Single-cell analysis in Python. Scales to >100M cells. | 815K | |
| Leveraging BERT and c-TF-IDF to create easily interpretable topics. | 381K | |
| A Fundamental End-to-End Speech Recognition Toolkit and Open Source SOTA Pretrai... | 357K | |
| 🐸💬 - a deep learning toolkit for Text-to-Speech, battle-tested in research and p... | 202K | |
| This is an open-source version of the representation engineering framework for s... | 167K | |
| Python package for graph statistics | 129K | |
| Topic modeling neural toolkit | 63K | |
| Computational Pathology Toolbox developed by TIA Centre, University of Warwick. | 32K | |
| A lightweight framework for benchmarking multimodal AI agents with parallel exec... | 30K | |
| Embedding Atlas is a tool that provides interactive visualizations for large emb... | 28K | |
| Retentioneering: product analytics, data-driven CJM optimization, marketing anal... | 28K | |
| muon is a multimodal omics Python framework | 28K | |
| Workbench: An easy to use Python API for creating and deploying AWS SageMaker Mo... | 22K | |
| Accelerated, Python-only, single-cell integration benchmarking metrics | 22K | |
| Benchmarking analysis of data integration tools | 18K | |
| RNA Velocity generalized through dynamical modeling | 18K | |
| exprmat: Routines for expression matrices | 15K | |
| senselab is a Python package that simplifies building pipelines for biometric (e... | 13K | |
| a UNIX shell toolkit for processing and analyzing multiple sequence alignments a... | 13K | |
| Batch balanced KNN | 11K | |
| Python package for systematic assessment of clustering results stability on sing... | 11K | |
| Modular visualization and analysis dashboard creation for high-resolution micros... | 10K | |
| Machine learning audio prediction experiments based on templates | 9K | |
| Kura is a tool for analysing and visualising chat data | 9K | |
| (ML) audio engineering i/o utils | 9K | |
| Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. ... | 9K | |
| Howso Visualization Utils | 8K | |
| Top2Vec learns jointly embedded topic, document and word vectors. | 8K | |
| Gene regulatory network inference | 7K | |
| Integrated tool for model development and validation. | 6K | |
| GUI for intializing and analyzing networks from segmentations of three dimension... | 6K | |
| Python package for extraction, spike clustering and processing of Intan recorded... | 6K | |
| AI Agents for drug discovery, drug development, and other pharmaceutical R&D. | 6K | |
| llama-index packs raptor integration | 6K | |
| User Friendly Application for Comprehensive Transcriptome Analysis | 6K | |
| eXtended Data Analysis Toolkit | 6K | |
| Intelligent data partitioning using quality control metrics | 6K | |
| Nyström Normalized Cut PyTorch Implementation | 6K | |
| Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data | 6K | |
| Kailash Python SDK — workflow orchestration, 140+ nodes, trust-aware execution | 5K | |
| A toolkit for processing single cell Hi-C data | 5K | |
| spaCR Spatial phenotype analysis of CRISPR–Cas9 screens (spaCR) | 5K | |
| A tool for analyzing trascriptomes of millions of single cells. | 5K | |
| Ordered Niche Trajectory Construction | 5K | |
| fedimpute is a benchmarking tool for federated imputation | 4K | |
| Library for extracting and analyzing persona vectors | 4K | |
| A package for Jiang lab | 4K | |
| ExpoSeq is a pipeline to process and analyze in various visualizations ngs data ... | 4K | |
| Large-scale generative pretrain of single cell using transformer. | 4K | |
| Integrated pipeline for multiplexed image analysis | 4K |
