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Dependencies
- anndata
- numpy
- pandas
- pynndescent
- scikit-learn
- scipy
- umap-learn >=0.5.0
23 optional dependencies
- coverage[test]
- cudf-cu12[cu12]
- cudf-cu13[cu13]
- cugraph-cu12[cu12]
- cugraph-cu13[cu13]
- cupy-cuda12x[cu12]
- cupy-cuda13x[cu13]
- harmonypy[test]
- ipykernel[doc]
- ipython[doc]
- joblib[test]
- myst-nb[doc]
- pre-commit[dev]
- pybtex-docutils[doc]
- pytest[test]
- scanpydoc[doc]
- scib-metrics[test]
- sphinx[doc]
- sphinx-book-theme[doc]
- sphinxcontrib-bibtex[doc]
- sphinx-copybutton[doc]
- sphinxext-opengraph[doc]
- twine[dev]