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TissueImageAnalytics
tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

32K 526 109
EIDOSlab
torchstain

Stain normalization tools for histological analysis and computational pathology

30K 179 30
slideflow
slideflow

Powerful, open-source AI tools for digital pathology.

2K 360 64
Dana-Farber-AIOS
pathml

Tools for computational pathology

1K 451 89
CBICA
openpatchminer

OpenSlide Patch Manager

1K 4 6
DIAGNijmegen
wholeslidedata

No description available

945 113 31
tand826
wsiprocess

Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks

465 25 3
gustaveroussy
prismtoolbox

Toolbox for histopathology image analysis

275 7 0
rendeirolab
stainx

Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silicon) devices.

172 6 0
ratschlab
aestetik

AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data

165 23 5
MWod
deeperhistreg

DeeperHistReg Framework - To Register WSI Images

146 96 18
AtlasAnalyticsLab
moozy

MOOZY: A Patient-First Foundation Model for Computational Pathology.

132 14 0
MECLabTUDA
harpipe

Histological Artifact Restoration Pipeline

105 9 0
SBU-BMI
wsinfer-mil

CLI tool to run specimen-level inference on whole slide images

102 7 1
SBU-BMI
spinpath

Run specimen-level inference on whole slide images.

63 7 1
abbvie-external
torchunmix

Automatic stain unmixing and augmentation for histopathology images in PyTorch

30 0 1
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