85 dependents
| Package | Description | Downloads/month |
|---|---|---|
| SCIV algorithm | 11K | |
| Data management with LLMs | 10K | |
| A collection of helper for table handling and visualization | 9K | |
| Frequently used commands in bioinformatics | 7K | |
| Automatic Generation of Visualizations and Infographics using Large Language Mod... | 7K | |
| spaCR Spatial phenotype analysis of CRISPR–Cas9 screens (spaCR) | 5K | |
| Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorx... | 4K | |
| ExpoSeq is a pipeline to process and analyze in various visualizations ngs data ... | 4K | |
| Generated from aind-library-template | 4K | |
| immuneML is a platform for machine learning analysis of adaptive immune receptor... | 4K | |
| Foli-seq data processing and analysis tools | 4K | |
| Library for determining whether a RNA splicing predictor is using frame alignmen... | 3K | |
| Analyze your RNA sequencing data without writing a single line of code | 3K | |
| A tool for analyzing RAS protein structures | 2K | |
| A python package to process protein cross-linking data. | 2K | |
| 🎨 Toolkit for generating publication-quality plots for Cell, Nature and Science ... | 1K | |
| generate gene co-function networks using omics data | 1K | |
| プログラミングを用いて、大学入試を解くモジュール | 1K | |
| Utility tools for rodent system neuroscience research | 1K | |
| Taxontabletools2 - A comprehensive, platform-independent graphical user interfac... | 1K | |
| MHCBooster: An AI-powered Software to Improve Immunopeptidome Identification fro... | 1K | |
| A pipeline for ribosome profiling data analysis | 1K | |
| Spatial phenotype analysis of crisp screens (SpaCr) | 1K | |
| Tools for de novo discovery of genomic germline IG and TR receptor sequences | 973 | |
| sourmash plugin for improved plotting/viz and cluster examination. | 954 | |
| A python package for working with various forms of feature tracking data | 912 | |
| Set of functionalities to assess molecular property prediction models. | 844 | |
| Bias factorized, base-resolution deep learning models of chromatin accessibility... | 835 | |
| 763 | ||
| Deciphering more accurate cell-cell interactions by modeling cells and their int... | 743 | |
| Pamola Core library for data anonymization, privacy models, metrics, and utiliti... | 737 | |
| Annotation of Metabolite Origin via Networks: A tool for predicting putative met... | 737 | |
| A software that simulates the dynamics of DNA replication by following a sofisti... | 734 | |
| Chemical descriptors is a powerful Python package facilitating calculation of fi... | 713 | |
| Single cell and spatial proteomics data analysis | 656 | |
| 590 | ||
| The Timewise Subtraction Pipeline produces mid-infrared difference photometry ba... | 559 | |
| Novel Integrated DNA/RNA Binding Site Analysis Tool | 488 | |
| Talus Utils | 487 | |
| High-level analysis package for (bio-)informatics | 486 | |
| SCIV: Unveiling the pivotal cell types involved in variant function regulation a... | 469 | |
| Python API for visualisation of sets. | 464 | |
| An application for building structural landscapes of RNA sequence modifications ... | 436 | |
| ATOMSCI AMPL is an open-source Python package for molecular property prediction ... | 409 | |
| Reactome Metrics and Coverage | 378 | |
| 350 | ||
| Add your description here | 350 | |
| Breath analysis in python | 347 | |
| Python package for analysis of slide-seq data on heart tissue | 338 | |
| A stability-aware gene network inference toolkit based on partial correlation, s... | 329 |
