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Dependencies
- aiodns >=3.2
- aiohttp >=3.11
- aiolimiter >=1.2
- appdirs >=1.4.4
- brotli >=1.0.9
- defusedxml >=0.7.1
- graphviz >=0.20.3
- grid-strategy >=0.0.1
- joblib >=1.4.2
- kmedoids >=0.5.3
- matplotlib >=3.10
- matplotlib-venn >=1.1.1
- mslex >=1.3.0
- nest-asyncio >=1.6.0
- numpy <3,>=2.0.0
- pairwisedist >=1.3.1
- pandas <3,>=2.2
- polars <1.31,>=1.30.0
- pyqt6 >=6.9
- pyyaml >=6.0
- qdarkstyle >=3
- requests >=2.32
- scikit-learn >=1.5.0
- scipy >=1.14.0
- seaborn >=0.13.2
- statsmodels >=0.14.0
- tenacity >=9.0.0
- tqdm >=4.67
- typing-extensions >=4.12
- upsetplot >=0.9.0
20 optional dependencies
- cutadapt[fastq]
- cutadapt[cutadapt]
- cutadapt[all]
- hdbscan[hdbscan]
- hdbscan[all]
- install-jdk[install-jdk]
- install-jdk[picardtools]
- install-jdk[all]
- networkx[networkx]
- networkx[reports]
- networkx[all]
- numba[randomization]
- numba[numba]
- numba[all]
- pyvis[reports]
- pyvis[pyvis]
- pyvis[all]
- xlmhglite[all]
- xlmhglite[single-set]
- xlmhglite[xlmhglite]